PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004920000
• symbol^?: —
• synonym:
• description^?: DUF3267 domain-containing protein

  descriptions from strain specific annotations:

  • DUF3267 domain-containing protein
  • putative staphylococcal protein
  • Permease
• strand^?: -
• coordinates^?: 5109241..5109771
• synteny block^?: BlockID0038260
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1956
N315:
SA1712
NCTC8325:
SAOUHSC_02112
Newman:
NWMN_1834
USA300_FPR3757:
SAUSA300_1877
04-02981:
SA2981_1852
08BA02176:
C248_1970
11819-97:
MS7_1931
6850:
RSAU_001783
71193:
ST398NM01_1989
ECT-R 2:
ECTR2_1767
ED133:
SAOV_1995
ED98:
SAAV_1962
HO 5096 0412:
SAEMRSA15_18030
JH1:
SaurJH1_1984
JH9:
SaurJH9_1950
JKD6008:
SAA6008_01916
JKD6159:
SAA6159_01827
LGA251:
SARLGA251_17780
M013:
M013TW_1932
MRSA252:
SAR1987
MSHR1132:
SAMSHR1132_17410
MSSA476:
SAS1818
Mu3:
SAHV_1881
Mu50:
SAV1896
MW2:
MW1837
RF122:
SAB1828c
ST398:
SAPIG1989
T0131:
SAT0131_02021 (gapR)
TCH60:
HMPREF0772_11247
TW20:
SATW20_18900
USA300_TCH1516:
USA300HOU_1895
VC40:
SAVC_08740

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MHKIDLTTNNFQMRRFIILQLVIALFVILFTYKWALGVTAVVDQNIIINLVYGFAGFIIL
  N315            MHKIDLTTNNFQMRRFIILQLVIALFVILFTYKWALGVTAVVDQNIIINLVYGFAGFIIL
  NCTC8325        MHKIDLTTNNFQMRRFIILQLVIALFVILFTYKWALGVTAVVDQNIIINLVYGFAGFIIL
  Newman          MHKIDLTTNNFQMRRFIILQLVIALFVILFTYKWALGVTAVVDQNIIINLVYGFAGFIIL
  USA300_FPR3757  MHKIDLTTNNFQMRRFIILQLVIALFVILFTYKWALGVTAVVDQNIIINLVYGFAGFIIL
                  ************************************************************
  
  COL             LILHELIHRALFLLFKKDSKPMFNIKKDRILFQTADACFNKWQFSIIMLSPLILLSTGLL
  N315            LILHELIHRALFLLFKKDSKPMFNIKKDRILFQTADACFNKWQFSIIMLSPLILLSTGLL
  NCTC8325        LILHELIHRALFLLFKKDSKPMFNIKKDRILFQTADACFNKWQFSIIMLSPLILLSTGLL
  Newman          LILHELIHRALFLLFKKDSKPMFNIKKDRILFQTADACFNKWQFSIIMLSPLILLSTGLL
  USA300_FPR3757  LILHELIHRALFLLFKKDSKPMFNIKKDRILFQTADACFNKWQFSIIMLSPLILLSTGLL
                  ************************************************************
  
  COL             ILIKVFGYSSLIFMFSMHTAYCFIDILLVALTISSSFKYVQQDEDSIYLYHQKPTQ
  N315            ILIKVFGYSSLIFMFSMHTAYCFIDILLVALTISSSFKYVQQDEDSIYLYHQKPTQ
  NCTC8325        ILIKVFGYSSLIFMFSMHTAYCFIDILLVALTISSSFKYVQQDEDSIYLYHQKPTQ
  Newman          ILIKVFGYSSLIFMFSMHTAYCFIDILLVALTISSSFKYVQQDEDSIYLYHQKPTQ
  USA300_FPR3757  ILIKVFGYSSLIFMFSMHTAYCFIDILLVALTISSSFKYVQQDEDSIYLYHQKPTQ
                  ********************************************************