PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004903000
• symbol^?: map
• synonym:
• description^?: methionine aminopeptidase

  descriptions from strain specific annotations:

  • methionine aminopeptidase
  • methionine aminopeptidase 1
  • type I methionyl aminopeptidase
  • M24 family methionyl aminopeptidase
  • methionine aminopeptidase, type I
  • putative metallopeptidase
• strand^?: -
• coordinates^?: 5098222..5098938
• synteny block^?: BlockID0038090
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1946
N315:
SA1704 (map)
NCTC8325:
SAOUHSC_02102
Newman:
NWMN_1826 (map1)
USA300_FPR3757:
SAUSA300_1869 (map)
04-02981:
SA2981_1844 (map)
08BA02176:
C248_1960
11819-97:
MS7_1923
6850:
RSAU_001775 (mapB)
71193:
ST398NM01_1981
ECT-R 2:
ECTR2_1759 (map)
ED133:
SAOV_1986
ED98:
SAAV_1953
HO 5096 0412:
SAEMRSA15_17950
JH1:
SaurJH1_1976
JH9:
SaurJH9_1942
JKD6008:
SAA6008_01908
JKD6159:
SAA6159_01819
LGA251:
SARLGA251_17700
M013:
M013TW_1924
MRSA252:
SAR1978
MSHR1132:
SAMSHR1132_17330
MSSA476:
SAS1810
Mu3:
SAHV_1873 (map)
Mu50:
SAV1888 (map)
MW2:
MW1828 (map)
RF122:
SAB1820c
ST398:
SAPIG1981 (map)
T0131:
SAT0131_02012
TCH60:
HMPREF0772_11256 (map2)
TW20:
SATW20_18820
USA300_TCH1516:
USA300HOU_1884 (map)
VC40:
SAVC_08695

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MIVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISAPIHDE
  N315            MIVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISAPIHDE
  NCTC8325        MIVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISAPIHDE
  Newman          MIVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISAPIHDE
  USA300_FPR3757  MIVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISAPIHDE
                  ************************************************************
  
  COL             NFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQ
  N315            NFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQ
  NCTC8325        NFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQ
  Newman          NFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQ
  USA300_FPR3757  NFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQ
                  ************************************************************
  
  COL             KVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIKNLTGHGVGLSLHEAPAH
  N315            KVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIKNLTGHGVGLSLHEAPAH
  NCTC8325        KVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIKNLTGHGVGLSLHEAPAH
  Newman          KVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIKNLTGHGVGLSLHEAPAH
  USA300_FPR3757  KVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIKNLTGHGVGLSLHEAPAH
                  ************************************************************
  
  COL             VLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVTK
  N315            VLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVTK
  NCTC8325        VLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVTK
  Newman          VLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVTK
  USA300_FPR3757  VLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVTK
                  ************************************************************
  
  COL             DGPILTTKIEEE
  N315            DGPILTTKIEEE
  NCTC8325        DGPILTTKIEEE
  Newman          DGPILTTKIEEE
  USA300_FPR3757  DGPILTTKIEEE
                  ************