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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004467000
- symbol?: —
- synonym:
- description?: autolysin
- autolysin
- beta-N-acetylglucosaminidase, putative
- mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
- N-acetylmuramoyl-L-alanine amidase
- exported protein
- family 4 N-acetylmuramoyl-L-alanine amidase
- mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein
- mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
- mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase family protein
- mannosyl-glycoprotein endo-beta-N-glucosaminidase
- peptidoglycan endo-beta-N-acetylglucosaminidase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4713518..4714376
- synteny block?: BlockID0034630
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1730
08BA02176:
C248_1820
11819-97:
MS7_1777
6850:
RSAU_001630
71193:
ST398NM01_1825
ECT-R 2:
ECTR2_1611
ED133:
SAOV_1759
ED98:
SAAV_1785
HO 5096 0412:
SAEMRSA15_16840
JH1:
SaurJH1_1862
JH9:
SaurJH9_1827
JKD6008:
SAA6008_01747
JKD6159:
SAA6159_01696
LGA251:
SARLGA251_16620
M013:
M013TW_1788
MRSA252:
SAR1857
MSHR1132:
SAMSHR1132_16220
MSSA476:
SAS1698
Mu3:
SAHV_1760
Mu50:
SAV1775
MW2:
MW1715
RF122:
SAB1633c
ST398:
SAPIG1825
T0131:
SAT0131_01890
TCH60:
HMPREF0772_11380
TW20:
SATW20_17650
USA300_TCH1516:
USA300HOU_1765
VC40:
—
⊟Genome Viewer[edit | edit source]
COL | |
N315 | |
NCTC8325 | |
Newman | |
USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNKHKKGSIFGIIGLVVIFAVVSFLFFSMISDQIFFKHVKSDIKIEKLNVTLNDAAKKQI
N315 MNKHKKGSIFGIIGLVVIFAVVSFLFFSMISDQIFFKHVKSDIKIEKLNVTLNDAAKKQI
NCTC8325 MNKHKKGSIFGIIGLVVIFAVVSFLFFSMISDQIFFKHVKSDIKIEKLNVTLNDAAKKQI
Newman MNKHKKGSIFGIIGLVVIFAVVSFLFFSMISDQIFFKHVKSDIKIEKLNVTLNDAAKKQI
USA300_FPR3757 MNKHKKGSIFGIIGLVVIFAVVSFLFFSMISDQIFFKHVKSDIKIEKLNVTLNDAAKKQI
************************************************************
COL NNYTSQQVSNKKNDAWRDASATEIKSAMDSGTFIDNEKQKYQFLDLSKYQGIDKNRIKRM
N315 NNYTSQQVSNKKNDAWRDASATEIKSAMDSGTFIDNEKQKYQFLDLSKYQGIDKNRIKRM
NCTC8325 NNYTSQQVSNKKNDAWRDASATEIKSAMDSGTFIDNEKQKYQFLDLSKYQGIDKNRIKRM
Newman NNYTSQQVSNKKNDAWRDASATEIKSAMDSGTFIDNEKQKYQFLDLSKYQGIDKNRIKRM
USA300_FPR3757 NNYTSQQVSNKKNDAWRDASATEIKSAMDSGTFIDNEKQKYQFLDLSKYQGIDKNRIKRM
************************************************************
COL LVDRPTLLKHTDDFLKAAKDKHVNEVYLISHALLETGAVKSELANGVEIDGKKYYNFYGV
N315 LVDRPTLLKHTDDFLKAAKDKHVNEVYLISHALLETGAVKSELANGVEIDGKKYYNFYGV
NCTC8325 LVDRPTLLKHTDDFLKAAKDKHVNEVYLISHALLETGAVKSELANGVEIDGKKYYNFYGV
Newman LVDRPTLLKHTDDFLKAAKDKHVNEVYLISHALLETGAVKSELANGVEIDGKKYYNFYGV
USA300_FPR3757 LVDRPTLLKHTDDFLKAAKDKHVNEVYLISHALLETGAVKSELANGVEIDGKKYYNFYGV
************************************************************
COL GALDKDPIKTGAEYAKKHGWDTPEKAISGGADFIHKHFLSSTDQNTLYSMRWNPKNPGEH
N315 GALDKDPIKTGAEYAKKHGWDTPEKAISGGADFIHKHFLSSTDQNTLYSMRWNPKNPGEH
NCTC8325 GALDKDPIKTGAEYAKKHGWDTPEKAISGGADFIHKHFLSSTDQNTLYSMRWNPKNPGEH
Newman GALDKDPIKTGAEYAKKHGWDTPEKAISGGADFIHKHFLSSTDQNTLYSMRWNPKNPGEH
USA300_FPR3757 GALDKDPIKTGAEYAKKHGWDTPEKAISGGADFIHKHFLSSTDQNTLYSMRWNPKNPGEH
************************************************************
COL QYATDIKWAESNATIIADFYKNMKTEGKYFKYFVYKDDSKHLNK
N315 QYATDIKWAESNATIIADFYKNMKTEGKYFKYFVYKDDSKHLNK
NCTC8325 QYATDIKWAESNATIIADFYKNMKTEGKYFKYFVYKDDSKHLNK
Newman QYATDIKWAESNATIIADFYKNMKTEGKYFKYFVYKDDSKHLNK
USA300_FPR3757 QYATDIKWAESNATIIADFYKNMKTEGKYFKYFVYKDDSKHLNK
********************************************