⊟Summary[edit | edit source]
- pan ID?: SAUPAN004207000
- symbol?: udk
- synonym:
- description?: uridine kinase
- uridine kinase
- uridine monophosphate kinase
- uridine/cytidine kinase
- Uridine kinase (C1)
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4459913..4460536
- synteny block?: BlockID0032350
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1569
08BA02176:
C248_1653 (udk)
11819-97:
MS7_1627 (udk)
6850:
RSAU_001473 (udk)
71193:
ST398NM01_1675
ECT-R 2:
ECTR2_1460 (udk)
ED133:
SAOV_1609 (udk)
ED98:
SAAV_1603 (udk)
HO 5096 0412:
SAEMRSA15_15290 (udk)
JH1:
SaurJH1_1702
JH9:
SaurJH9_1668
JKD6008:
SAA6008_01581 (udk)
JKD6159:
SAA6159_01544 (udk)
LGA251:
SARLGA251_15140 (udk)
M013:
M013TW_1630
MRSA252:
SAR1690 (udk)
MSHR1132:
SAMSHR1132_14480
MSSA476:
SAS1547
Mu3:
SAHV_1598 (udk)
Mu50:
SAV1611 (udk)
MW2:
MW1561 (udk)
RF122:
SAB1482c (udk)
ST398:
SAPIG1675 (udk)
T0131:
SAT0131_01708
TCH60:
HMPREF0772_11530 (udk)
TW20:
SATW20_16060 (udk)
USA300_TCH1516:
USA300HOU_1611 (udk)
VC40:
SAVC_07305
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKATTIIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDH
N315 MKATTIIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDH
NCTC8325 MKATTIIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDH
Newman MKATTIIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDH
USA300_FPR3757 MKATTIIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDH
************************************************************
COL PFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDITIDFKPKDVIIVEGIFALENKVL
N315 PFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDITIDFKPKDVIIVEGIFALENKVL
NCTC8325 PFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDITIDFKPKDVIIVEGIFALENKVL
Newman PFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDITIDFKPKDVIIVEGIFALENKVL
USA300_FPR3757 PFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDITIDFKPKDVIIVEGIFALENKVL
************************************************************
COL RDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYAD
N315 RDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYAD
NCTC8325 RDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYAD
Newman RDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYAD
USA300_FPR3757 RDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYAD
************************************************************
COL IIIPEGGSNKVAIDIMTTKIQSLVSKQ
N315 IIIPEGGSNKVAIDIMTTKIQSLVSKQ
NCTC8325 IIIPEGGSNKVAIDIMTTKIQSLVSKQ
Newman IIIPEGGSNKVAIDIMTTKIQSLVSKQ
USA300_FPR3757 IIIPEGGSNKVAIDIMTTKIQSLVSKQ
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