⊟Summary[edit | edit source]
- pan ID?: SAUPAN003587000
- symbol?: recA
- synonym:
- description?: recombinase A
- recombinase A
- DNA recombination/repair protein RecA
- recombinase RecA
- protein RecA
- Reca
- RecA protein
- recombination protein A
- recombination protein RecA
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3927370..3928413
- synteny block?: BlockID0026640
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1243 (recA)
08BA02176:
C248_1318 (recA)
11819-97:
MS7_1243 (recA)
6850:
RSAU_001168 (recA)
71193:
ST398NM01_1287
ECT-R 2:
ECTR2_1141 (recA)
ED133:
SAOV_1287 (recA)
ED98:
SAAV_1260 (recA)
HO 5096 0412:
SAEMRSA15_11180 (recA)
JH1:
SaurJH1_1371 (recA)
JH9:
SaurJH9_1345 (recA)
JKD6008:
SAA6008_01240 (recA)
JKD6159:
SAA6159_01140 (recA)
LGA251:
SARLGA251_11960 (recA)
M013:
M013TW_1227
MRSA252:
SAR1261 (recA)
MSHR1132:
SAMSHR1132_11280
MSSA476:
SAS1219 (recA)
Mu3:
SAHV_1275 (recA)
Mu50:
SAV1285 (recA)
MW2:
MW1168 (recA)
RF122:
SAB1147 (recA)
ST398:
SAPIG1287 (recA)
T0131:
SAT0131_01341
TCH60:
HMPREF0772_11943 (recA)
TW20:
SATW20_12790 (recA)
USA300_TCH1516:
USA300HOU_1217 (recA)
VC40:
SAVC_05590 (recA)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MDNDRQKALDTVIKNMEKSFGKGAVMKLGDNIGRRVSTTSTGSVTLDNALGVGGYPKGRI
N315 MDNDRQKALDTVIKNMEKSFGKGAVMKLGDNIGRRVSTTSTGSVTLDNALGVGGYPKGRI
NCTC8325 MDNDRQKALDTVIKNMEKSFGKGAVMKLGDNIGRRVSTTSTGSVTLDNALGVGGYPKGRI
Newman MDNDRQKALDTVIKNMEKSFGKGAVMKLGDNIGRRVSTTSTGSVTLDNALGVGGYPKGRI
USA300_FPR3757 MDNDRQKALDTVIKNMEKSFGKGAVMKLGDNIGRRVSTTSTGSVTLDNALGVGGYPKGRI
************************************************************
COL IEIYGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEYAQALGVDIDNLYLSQPDH
N315 IEIYGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEYAQALGVDIDNLYLSQPDH
NCTC8325 IEIYGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEYAQALGVDIDNLYLSQPDH
Newman IEIYGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEYAQALGVDIDNLYLSQPDH
USA300_FPR3757 IEIYGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEYAQALGVDIDNLYLSQPDH
************************************************************
COL GEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLSGA
N315 GEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLSGA
NCTC8325 GEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLSGA
Newman GEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLSGA
USA300_FPR3757 GEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLSGA
************************************************************
COL ISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQEIVGNR
N315 ISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQEIVGNR
NCTC8325 ISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQEIVGNR
Newman ISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQEIVGNR
USA300_FPR3757 ISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQEIVGNR
************************************************************
COL TKIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGERMGQG
N315 TKIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGERMGQG
NCTC8325 TKIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGERMGQG
Newman TKIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGERMGQG
USA300_FPR3757 TKIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGERMGQG
************************************************************
COL KENVKMYLKENPQIKEEIDRKLREKLGISDGDVEETEDAPKSLFDEE
N315 KENVKMYLKENPQIKEEIDRKLREKLGISDGDVEETEDAPKSLFDEE
NCTC8325 KENVKMYLKENPQIKEEIDRKLREKLGISDGDVEETEDAPKSLFDEE
Newman KENVKMYLKENPQIKEEIDRKLREKLGISDGDVEETEDAPKSLFDEE
USA300_FPR3757 KENVKMYLKENPQIKEEIDRKLREKLGISDGDVEETEDAPKSLFDEE
***********************************************