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Summary[edit | edit source]

  • pan ID?: SAUPAN003337000
  • symbol?:
  • synonym:
  • description?: DUF2197 domain-containing protein

      descriptions from strain specific annotations:

    • DUF2197 domain-containing protein
    • putative DUF2197-containing protein
    • YlaI family protein
  • strand?: -
  • coordinates?: 3703487..3703645
  • synteny block?: BlockID0024210
  • occurrence?: in 94% of 33 strains

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1067
    08BA02176:
    C248_1137
    11819-97:
    MS7_1067
    6850:
    RSAU_000995
    71193:
    ST398NM01_1107
    ECT-R 2:
    ECTR2_965
    ED133:
    ED98:
    SAAV_1076
    HO 5096 0412:
    SAEMRSA15_09400
    JH1:
    SaurJH1_1192
    JH9:
    SaurJH9_1170
    JKD6008:
    SAA6008_01065
    JKD6159:
    LGA251:
    SARLGA251_10230
    M013:
    M013TW_1042
    MRSA252:
    SAR1084
    MSHR1132:
    SAMSHR1132_09570
    MSSA476:
    SAS1045
    Mu3:
    SAHV_1102
    Mu50:
    SAV1110
    MW2:
    MW0993
    RF122:
    SAB0975c
    ST398:
    SAPIG1107
    T0131:
    SAT0131_01149 (glpT)
    TCH60:
    HMPREF0772_12122
    TW20:
    SATW20_11050
    USA300_TCH1516:
    USA300HOU_1048
    VC40:
    SAVC_04715

Genome Viewer[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    COL             MRQVQCIICDAKVFIDERTTESKRLKNNPIRTFMCDDCKSRLDTPKQRAQHYPLD
    N315            MRQVQCIICDAKVFIDERTTESKRLKNNPIRTFMCDDCKSRLDTPKQRAQHYPLD
    NCTC8325        MRQVQCIICDAKVFIDERTTESKRLKNNPIRTFMCDDCKSRLDTPKQRAQHYPLD
    Newman          MRQVQCIICDAKVFIDERTTESKRLKNNPIRTFMCDDCKSRLDTPKQRAQHYPLD
    USA300_FPR3757  MRQVQCIICDAKVFIDERTTESKRLKNNPIRTFMCDDCKSRLDTPKQRAQHYPLD
                    *******************************************************