PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003249000
• symbol^?: sspC
• synonym:
• description^?: staphostatin B

  descriptions from strain specific annotations:

  • staphostatin B
  • cysteine protease
  • cysteine protease precursor
  • sspC protein
  • chain A, Staphostatins Resemble Lipocalins, Not Cystatins In Fold
  • I57 family staphostatin B
  • staphostatin B (Staphylococcal cysteine protease B inhibitor)
• strand^?: -
• coordinates^?: 3625716..3626049
• synteny block^?: BlockID0023330
• occurrence^?: in 97% of 33 strains

⊟Orthologs

COL:
SACOL1055 (sspC)
N315:
SA0899 (sspC)
NCTC8325:
SAOUHSC_00986
Newman:
NWMN_0916 (sspC)
USA300_FPR3757:
SAUSA300_0949 (sspC)
04-02981:
SA2981_1001 (sspC)
08BA02176:
C248_1071 (sspC)
11819-97:
MS7_1004 (sspC)
6850:
—
71193:
ST398NM01_1044
ECT-R 2:
ECTR2_902
ED133:
SAOV_0992c
ED98:
SAAV_1010 (sspC)
HO 5096 0412:
SAEMRSA15_08780 (sspC)
JH1:
SaurJH1_1128
JH9:
SaurJH9_1105
JKD6008:
SAA6008_01001
JKD6159:
SAA6159_00903
LGA251:
SARLGA251_09610 (sspC)
M013:
M013TW_0976
MRSA252:
SAR1020 (sspC)
MSHR1132:
SAMSHR1132_08950
MSSA476:
SAS0982
Mu3:
SAHV_1039 (sspC)
Mu50:
SAV1046 (sspC)
MW2:
MW0930 (sspC)
RF122:
SAB0913c (sspC)
ST398:
SAPIG1044
T0131:
SAT0131_01081
TCH60:
HMPREF0772_12188 (sspC)
TW20:
SATW20_10430 (sspC)
USA300_TCH1516:
USA300HOU_0994 (sspC)
VC40:
SAVC_04400

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MYQLQFINLVYDTTKLTHLEQTNINLFIGNWSNHQLQKSICIRHGDDTSHNQYHILFIDT
  N315            MYQLQFINLVYDTTKLTHLEQTNINLFIGNWSNHQLQKSICIRHGDDTSHNQYHILFIDT
  NCTC8325        MYQLQFINLVYDTTKLTHLEQTNINLFIGNWSNHQLQKSICIRHGDDTSHNQYHILFIDT
  Newman          MYQLQFINLVYDTTKLTHLEQTNINLFIGNWSNHQLQKSICIRHGDDTSHNQYHILFIDT
  USA300_FPR3757  MYQLQFINLVYDTTKLTHLEQTNINLFIGNWSNHQLQKSICIRHGDDTSHNQYHILFIDT
                  ************************************************************
  
  COL             AHQRIKFSSIDNEEIIYILDYDDTQHILMQTSSKQGIGTSRPIVYERLV
  N315            AHQRIKFSSIDNEEITYILDYDDTQHILMQTSSKQGIGTSRPIVYERLV
  NCTC8325        AHQRIKFSSIDNEEIIYILDYDDTQHILMQTSSKQGIGTSRPIVYERLV
  Newman          AHQRIKFSSIDNEEIIYILDYDDTQHILMQTSSKQGIGTSRPIVYERLV
  USA300_FPR3757  AHQRIKFSSIDNEEIIYILDYDDTQHILMQTSSKQGIGTSRPIVYERLV
                  *************** *********************************