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Summary[edit | edit source]

  • pan ID?: SAUPAN002573000
  • symbol?:
  • synonym:
  • description?: hypothetical protein
  • strand?: +
  • coordinates?: 3084953..3085240
  • synteny block?: BlockID0018090
  • occurrence?: in 100% of 33 strains

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0666
    08BA02176:
    C248_0774
    11819-97:
    MS7_0741
    6850:
    RSAU_000665
    71193:
    ST398NM01_0767
    ECT-R 2:
    ECTR2_641
    ED133:
    SAOV_0724
    ED98:
    SAAV_0652
    HO 5096 0412:
    SAEMRSA15_06150
    JH1:
    SaurJH1_0729
    JH9:
    SaurJH9_0713
    JKD6008:
    SAA6008_00706
    JKD6159:
    SAA6159_00644
    LGA251:
    SARLGA251_06220
    M013:
    M013TW_0676
    MRSA252:
    SAR0742
    MSHR1132:
    SAMSHR1132_06350
    MSSA476:
    SAS0654
    Mu3:
    SAHV_0686
    Mu50:
    SAV0689
    MW2:
    MW0651
    RF122:
    SAB0638
    ST398:
    SAPIG0767
    T0131:
    SAT0131_00760
    TCH60:
    HMPREF0772_12498
    TW20:
    SATW20_07640
    USA300_TCH1516:
    USA300HOU_0712
    VC40:
    SAVC_03080

Genome Viewer[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    COL             MTNEDKRFEQLRFERKFIVIPYLIYAVIVLLLNIFYSDLKITMTLFGLFFAYNVVILFIA
    N315            MTNEDKRFEQLRFERKFIVIPYLIYAVIVLLLNIFYSDLKITMTLFGLFFAYNVVILFIA
    NCTC8325        MTNEDKRFEQLRFERKFIVIPYLIYAVIVLLLNIFYSDLKITMTLFGLFFAYNVVILFIA
    Newman          MTNEDKRFEQLRFERKFIVIPYLIYAVIVLLLNIFYSDLKITMTLFGLFFAYNVVILFIA
    USA300_FPR3757  MTNEDKRFEQLRFERKFIVIPYLIYAVIVLLLNIFYSDLKITMTLFGLFFAYNVVILFIA
                    ************************************************************

    COL             FVKHYKRTLLLSLILTVLSGAAFFGIIYVYGINHF
    N315            FIKHYKRTLLLSLILTVLSGAAFFGIIYVYGINHF
    NCTC8325        FVKHYKRTLLLSLILTVLSGAAFFGIIYVYGINHF
    Newman          FVKHYKRTLLLSLILTVLSGAAFFGIIYVYGINHF
    USA300_FPR3757  FVKHYKRTLLLSLILTVLSGAAFFGIIYVYGINHF
                    *:*********************************