⊟Summary[edit | edit source]
- pan ID?: SAUPAN002325000
- symbol?: —
- synonym:
- description?: UDP-glucose 4-epimerase
- UDP-glucose 4-epimerase
- NAD-dependent epimerase/dehydratase family protein
- polysaccharide biosynthesis protein CapD
- putative epimerase/dehydratase
- epimerase/reductase, putative
- L-threonine 3-dehydrogenase
- NAD-dependent epimerase/dehydratase
- polysaccharide biosynthesis family protein
- UDP-glucose 4-epimerase-like protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2846172..2847206
- synteny block?: BlockID0016240
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0530
08BA02176:
C248_0628
11819-97:
MS7_0543
6850:
RSAU_000505
71193:
ST398NM01_0628
ECT-R 2:
ECTR2_507
ED133:
SAOV_0588
ED98:
SAAV_0516
HO 5096 0412:
SAEMRSA15_04800
JH1:
SaurJH1_0590
JH9:
SaurJH9_0576
JKD6008:
SAA6008_00559 (capD)
JKD6159:
SAA6159_00507 (capD)
LGA251:
SARLGA251_04890
M013:
M013TW_0540
MRSA252:
SAR0558
MSHR1132:
SAMSHR1132_04970
MSSA476:
SAS0511
Mu3:
SAHV_0551
Mu50:
SAV0553
MW2:
MW0508
RF122:
SAB0504
ST398:
SAPIG0628
T0131:
SAT0131_00606
TCH60:
HMPREF0772_12636 (tdh)
TW20:
SATW20_06230
USA300_TCH1516:
USA300HOU_0546
VC40:
SAVC_02355
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKIMITGALGQIGTELVVKCREIYGTDNVLATDIREPEADSPVQNGPFEILDVTDRDRM
N315 MKKIMITGALGQIGTELVVKCREIYGTDNVLATDIREPEADSPVQNGPFEILDVTDRDRM
NCTC8325 MKKIMITGALGQIGTELVVKCREIYGTDNVLATDIREPEADSPVQNGPFEILDVTDRDRM
Newman MKKIMITGALGQIGTELVVKCREIYGTDNVLATDIREPEADSPVQNGPFEILDVTDRDRM
USA300_FPR3757 MKKIMITGALGQIGTELVVKCREIYGTDNVLATDIREPEADSPVQNGPFEILDVTDRDRM
************************************************************
COL FELVRDFEADSLMHMAALLSATAEKNPILAWDLNMGGLMNALEAARTYNLHFFTPSSIGA
N315 FELVRDFEADSLMHMAALLSATAEKNPILAWDLNMGGLMNALEAARTYNLHFFTPSSIGA
NCTC8325 FELVRDFEADSLMHMAALLSATAEKNPILAWDLNMGGLMNALEAARTYNLHFFTPSSIGA
Newman FELVRDFEADSLMHMAALLSATAEKNPILAWDLNMGGLMNALEAARTYNLHFFTPSSIGA
USA300_FPR3757 FELVRDFEADSLMHMAALLSATAEKNPILAWDLNMGGLMNALEAARTYNLHFFTPSSIGA
************************************************************
COL FGDSTPKVNTPQVTIQQPTTMYGVNKVAGELLCQYYFKRFGVDTRSVRFPGLISHVKEPG
N315 FGDSTPKVNTPQVTIQQPTTMYGVNKVAGELLCQYYFKRFGVDTRSVRFPGLISHVKEPG
NCTC8325 FGDSTPKVNTPQVTIQQPTTMYGVNKVAGELLCQYYFKRFGVDTRSVRFPGLISHVKEPG
Newman FGDSTPKVNTPQVTIQQPTTMYGVNKVAGELLCQYYFKRFGVDTRSVRFPGLISHVKEPG
USA300_FPR3757 FGDSTPKVNTPQVTIQQPTTMYGVNKVAGELLCQYYFKRFGVDTRSVRFPGLISHVKEPG
************************************************************
COL GGTTDYAVEIYFKAVREGHYTSFIDKGTYMDMMYMDDAIEAIIKLMEADDAKLETRNGYN
N315 GGTTDYAVEIYFKAVREGHYTSFIDKGTYMDMMYMDDAIEAIIKLMEADDAKLETRNGYN
NCTC8325 GGTTDYAVEIYFKAVREGHYTSFIDKGTYMDMMYMDDAIEAIIKLMEADDAKLETRNGYN
Newman GGTTDYAVEIYFKAVREGHYTSFIDKGTYMDMMYMDDAIEAIIKLMEADDAKLETRNGYN
USA300_FPR3757 GGTTDYAVEIYFKAVREGHYTSFIDKGTYMDMMYMDDAIEAIIKLMEADDAKLETRNGYN
************************************************************
COL LSAMSFDPEMVKEAIQEYYPNFTLDYDVDPIRQGIANSWPDSIDTSCSRGEWGFDPKYDL
N315 LSAMSFDPEMVKEAIQEYYPNFTLDYDVDPIRQGIANSWPDSIDTSCSRGEWGFDPKYDL
NCTC8325 LSAMSFDPEMVKEAIQEYYPNFTLDYDVDPIRQGIANSWPDSIDTSCSRGEWGFDPKYDL
Newman LSAMSFDPEMVKEAIQEYYPNFTLDYDVDPIRQGIANSWPDSIDTSCSRGEWGFDPKYDL
USA300_FPR3757 LSAMSFDPEMVKEAIQEYYPNFTLDYDVDPIRQGIANSWPDSIDTSCSRGEWGFDPKYDL
************************************************************
COL ASMTKLMLEAIEQKDTVKNNN
N315 ASMTKLMLEAIEQKDTVKNNN
NCTC8325 ASMTKLMLEAIEQKDTVKNNN
Newman ASMTKLMLEAIEQKDTVKNNN
USA300_FPR3757 ASMTKLMLEAIEQKDTVKNNN
*********************