⊟Summary[edit | edit source]
- pan ID?: SAUPAN002235000
- symbol?: yabJ
- synonym:
- description?: RidA family protein
- RidA family protein
- adenine-mediated repressor of purine biosynthetic genes YabJ
- endoribonuclease L-PSP
- putative endoribonuclease L-PSP
- endoribonuclease L-PSP, putative
- putative regulatory protein
- rutC family protein yabJ
- translation initiation inhibitor homologue
- translation initiation inhibitor-like protein
- YabJ, a purine regulatory protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2743162..2743542
- synteny block?: BlockID0015340
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0472
08BA02176:
C248_0552 (yabJ)
11819-97:
MS7_0474 (yabJ)
6850:
RSAU_000434 (yabJ)
71193:
ST398NM01_0563
ECT-R 2:
ECTR2_437
ED133:
SAOV_0519
ED98:
SAAV_0444
HO 5096 0412:
SAEMRSA15_04230 (yabJ)
JH1:
SaurJH1_0531
JH9:
SaurJH9_0518
JKD6008:
SAA6008_00501
JKD6159:
SAA6159_00448
LGA251:
SARLGA251_04310 (yabJ)
M013:
M013TW_0468
MRSA252:
SAR0498 (yabJ)
MSHR1132:
SAMSHR1132_04410
MSSA476:
SAS0454
Mu3:
SAHV_0494
Mu50:
SAV0497
MW2:
MW0452
RF122:
SAB0446 (yabJ)
ST398:
SAPIG0563
T0131:
SAT0131_00542
TCH60:
HMPREF0772_10023
TW20:
SATW20_05650 (yabJ)
USA300_TCH1516:
—
VC40:
SAVC_02070
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKIINTTRLPEALGPYSHATVVNGMVYTSGQIPLNIDGHIVSADVQAQTKQVLENLKVVL
N315 MKIINTTRLPEALGPYSHATVVNGMVYTSGQIPLNVDGKIVSADVQAQTKQVLENLKVVL
NCTC8325 MKIINTTRLPEALGPYSHATVVNGMVYTSGQIPLNIDGHIVSADVQAQTKQVLENLKVVL
Newman MKIINTTRLPEALGPYSHATVVNGMVYTSGQIPLNIDGHIVSADVQAQTKQVLENLKVVL
USA300_FPR3757 MKIINTTRLPEALGPYSHATVVNGMVYTSGQIPLNIDGHIVSADVQAQTKQVLENLKVVL
***********************************:**:*********************
COL EEAGSDLNSVAKATIFIKDMNDFQKINEVYGQYFNEHKPARSCVEVARLPKDVKVEIELV
N315 EEAGSDLNSVAKATIFIKDMNDFQKINEVYGQYFNEHKPARSCVEVARLPKDVKVEIELV
NCTC8325 EEAGSDLNSVAKATIFIKDMNDFQKINEVYGQYFNEHKPARSCVEVARLPKDVKVEIELV
Newman EEAGSDLNSVAKATIFIKDMNDFQKINEVYGQYFNEHKPARSCVEVARLPKDVKVEIELV
USA300_FPR3757 EEAGSDLNSVAKATIFIKDMNDFQKINEVYGQYFNEHKPARSCVEVARLPKDVKVEIELV
************************************************************
COL SKIKEL
N315 SKIKEL
NCTC8325 SKIKEL
Newman SKIKEL
USA300_FPR3757 SKIKEL
******