PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN001992000
• symbol^?: —
• synonym:
• description^?: putative heat induced stress protein

  descriptions from strain specific annotations:

  • putative heat induced stress protein
  • transcriptional regulator
• strand^?: -
• coordinates^?: 2457793..2458200
• synteny block^?: BlockID0013450
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0457
N315:
SA0372
NCTC8325:
SAOUHSC_00371
Newman:
NWMN_0377
USA300_FPR3757:
SAUSA300_0385
04-02981:
SA2981_0385
08BA02176:
C248_0443
11819-97:
MS7_0376
6850:
RSAU_000330
71193:
ST398NM01_0464
ECT-R 2:
ECTR2_346
ED133:
SAOV_0409c
ED98:
SAAV_0353
HO 5096 0412:
SAEMRSA15_03390
JH1:
SaurJH1_0445
JH9:
SaurJH9_0434
JKD6008:
SAA6008_00386 (yflT)
JKD6159:
SAA6159_00361 (yflT)
LGA251:
SARLGA251_03470
M013:
M013TW_0366
MRSA252:
SAR0405
MSHR1132:
SAMSHR1132_03580
MSSA476:
SAS0363
Mu3:
SAHV_0384
Mu50:
SAV0387
MW2:
MW0363
RF122:
SAB0337c
ST398:
SAPIG0464
T0131:
SAT0131_00419 (capD)
TCH60:
HMPREF0772_10107
TW20:
SATW20_04530
USA300_TCH1516:
USA300HOU_0410
VC40:
SAVC_01685

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MADITVVNDTGELYNVINQKKSEGYLESELTIISKSKLHLNDLHDSEISLISTSGTFSDR
  N315            MADITVVNDTGELYNVINQKKSEGYLESELTIISKSKLHLNDLHDSEISLISTSGTFSDR
  NCTC8325        MADITVVNDTGELYNVINQKKSEGYLESELTIISKSKLHLNDLHDSEISLISTSGTFSDR
  Newman          MADITVVNDTGELYNVINQKKSEGYLESELTIISKSKLHLNDLHDSEISLISTSGTFSDR
  USA300_FPR3757  MADITVVNDTGELYNVINQKKSEGYLESELTIISKSKLHLNDLHDSEISLISTSGTFSDR
                  ************************************************************
  
  COL             MTKLLTGEDGEHAVLSRYNLAPDELEKYKQLILDDKMLVVAVRDKSSHQEVHENNSAYEE
  N315            MTKLLTGEDGEHAVLSRYNLAPDELEKYKQLILDDKMLVVAVRDKSSHKEVQEHNSAYEE
  NCTC8325        MTKLLTGEDGEHAVLSRYNLAPDELEKYKQLILDDKMLVVAVRDKSSHQEVHENNSAYEE
  Newman          MTKLLTGEDGEHAVLSRYNLAPDELEKYKQLILDDKMLVVAVRDKSSHQEVHENNSAYEE
  USA300_FPR3757  MTKLLTGEDGEHAVLSRYNLAPDELEKYKQLILDDKMLVVAVRDKSSHQEVHENNSAYEE
                  ************************************************:**:*:******
  
  COL             IDITHFAEASKGPKA
  N315            IDITHFAEASKGPKA
  NCTC8325        IDITHFAEASKGPKA
  Newman          IDITHFAEASKGPKA
  USA300_FPR3757  IDITHFAEASKGPKA
                  ***************