PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN001888000
• symbol^?: tatC
• synonym:
• description^?: twin-arginine translocase subunit TatC

  descriptions from strain specific annotations:

  • twin-arginine translocase subunit TatC
  • MttB family protein
  • Sec-independent protein translocase TatC
  • twin-arginine protein translocase protein subunit C
  • putative Sec-independent protein translocase protein
  • Twin arginine-targeting protein translocase TatC
  • Sec-independent periplasmic protein translocase
  • sec-independent protein translocase protein
  • sec-independent translocase protein (TatC) family protein
  • Tat family twin arginine targeting transporter TatC
  • Twin-arginine translocation protein TatC
• strand^?: -
• coordinates^?: 2378653..2379132
• synteny block^?: BlockID0012610
• occurrence^?: in 94% of 33 strains

⊟Orthologs

COL:
SACOL0417
N315:
SA0334
NCTC8325:
SAOUHSC_00328
Newman:
NWMN_0339
USA300_FPR3757:
SAUSA300_0347 (tatC)
04-02981:
SA2981_0344 (tatC)
08BA02176:
—
11819-97:
MS7_0336 (tatC)
6850:
RSAU_000291 (tatC)
71193:
ST398NM01_2814
ECT-R 2:
ECTR2_306
ED133:
SAOV_0370c
ED98:
SAAV_0314
HO 5096 0412:
SAEMRSA15_03010
JH1:
SaurJH1_0404
JH9:
SaurJH9_0394
JKD6008:
SAA6008_00323 (tatC)
JKD6159:
SAA6159_00320 (tatC)
LGA251:
SARLGA251_03080
M013:
M013TW_0325
MRSA252:
SAR0343
MSHR1132:
SAMSHR1132_03190
MSSA476:
SAS0322
Mu3:
SAHV_0343
Mu50:
SAV0346
MW2:
MW0322
RF122:
SAB0296c
ST398:
—
T0131:
SAT0131_00353
TCH60:
HMPREF0772_10148 (tatC)
TW20:
SATW20_04140
USA300_TCH1516:
USA300HOU_0367
VC40:
SAVC_01480

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             --MSFVITVIVVYVSSFWWMTPFITYITRAHVSLHAFSFTEMIQIYVMIIFFIAFCFISP
  N315            MLLSFVVTVIVVYVSSFWWMTPFITYITRAHVSLHAFSFTEMIQIYVMIIFFIAFCFISP
  NCTC8325        --MSFVITVIVVYVSSFWWMTPFITYITRAHVSLHAFSFTEMIQIYVMIIFFIAFCFISP
  Newman          --MSFVITVIVVYVSSFWWMTPFITYITRAHVSLHAFSFTEMIQIYVMIIFFIAFCFISP
  USA300_FPR3757  --MSFVITVIVVYVSSFWWMTPFITYITRAHVSLHAFSFTEMIQIYVMIIFFIAFCFISP
                    :***:*****************************************************
  
  COL             VMFYQLWAFIAPGLHNNERQFIYKYSFFSVLLFCAGVAFAFYVGFPMIIQFALKLSLTLN
  N315            VMFYQLWAFIAPGLHNNERQFIYKYSFFSVLLFCAGVAFAFYVGFPIIIQFALKLSLTLN
  NCTC8325        VMFYQLWAFIAPGLHNNERQFIYKYSFFSVLLFCAGVAFAFYVGFPMIIQFALKLSLTLN
  Newman          VMFYQLWAFIAPGLHNNERQFIYKYSFFSVLLFCAGVAFAFYVGFPMIIQFALKLSLTLN
  USA300_FPR3757  VMFYQLWAFIAPGLHNNERQFIYKYSFFSVLLFCAGVAFAFYVGFPMIIQFALKLSLTLN
                  **********************************************:*************
  
  COL             ISPVIGFKAYLIELIRWLFTFGLLFQLPILFMGLAKFGLIDTTSLKHYRKYIYFACFVLA
  N315            ISPVIGFKAYLVELIRWLFTFGILFQLPILFIGLAKFGLIDITSLKHYRKYIYFACFVLA
  NCTC8325        ISPVIGFKAYLIELIRWLFTFGLLFQLPILFMGLAKFGLIDTTSLKHYRKYIYFACFVLA
  Newman          ISPVIGFKAYLIELIRWLFTFGLLFQLPILFMGLAKFGLIDTTSLKHYRKYIYFACFVLA
  USA300_FPR3757  ISPVIGFKAYLIELIRWLFTFGLLFQLPILFMGLAKFGLIDTTSLKHYRKYIYFACFVLA
                  ***********:**********:********:********* ******************
  
  COL             SIIAPPDLTLNILLTLPLILLFEFSMFIVKFTCRGKPPTH
  N315            SIIAPPDLTLNILLTLPLILLFEFSMFIVKFTCRGKPPTH
  NCTC8325        SIIAPPDLTLNILLTLPLILLFEFSMFIVKFTCRGKPPTH
  Newman          SIIAPPDLTLNILLTLPLILLFEFSMFIVKFTCRGKPPTH
  USA300_FPR3757  SIIAPPDLTLNILLTLPLILLFEFSMFIVKFTCRGKPPTH
                  ****************************************