⊟Summary[edit | edit source]
- pan ID?: SAUPAN001029000
- symbol?: —
- synonym:
- description?: isochorismatase
- isochorismatase
- IS1272 transposase, putative
- Isochorismatase family protein
- isochorismatase hydrolase
- isochorismatase transposase
- Nicotinamidase/isochorismatase family protein
- putative isochorismatase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1301733..1302230
- synteny block?: BlockID0005560
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0188
08BA02176:
C248_0178
11819-97:
MS7_0180
6850:
RSAU_000138
71193:
ST398NM01_0204
ECT-R 2:
ECTR2_150
ED133:
SAOV_0131 (entB)
ED98:
SAAV_0155 (entB)
HO 5096 0412:
SAEMRSA15_01520
JH1:
SaurJH1_0177
JH9:
SaurJH9_0172
JKD6008:
SAA6008_00165
JKD6159:
SAA6159_00168
LGA251:
SARLGA251_01580
M013:
M013TW_0174
MRSA252:
SAR0188
MSHR1132:
SAMSHR1132_01620
MSSA476:
SAS0162
Mu3:
SAHV_0186
Mu50:
SAV0187
MW2:
MW0161
RF122:
SAB0127c
ST398:
SAPIG0204
T0131:
SAT0131_00179
TCH60:
HMPREF0772_10312 (entB)
TW20:
SATW20_01970
USA300_TCH1516:
USA300HOU_0200
VC40:
SAVC_00700
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL --------------------MDYAPYTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGK
N315 --------------------MDYAPHTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGK
NCTC8325 --------------------MDYAPYTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGK
Newman MINFNKTALVLIDLQEGILKMDYAPYTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGK
USA300_FPR3757 --------------------MDYAPYTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGK
*****:**********************************
COL DVLQPNAMISLPPKEGDDYSRFHHLLDKRDDDFVIDKRHFSAFVGTDLDLQLRRRGIDTI
N315 DVLQPNAMISLPPKEGDDYSRFHHLLDKRDDDFVIDKRHFSAFVGTDLDLQLRRRGIDTI
NCTC8325 DVLQPNVMISLPPKEGDDYSRFHHLLDKRDDDFVIDKRHFSAFVGTDLDLQLRRRGIDTI
Newman DVLQPNAMISLPPKEGDDYSRFHHLLDKRDDDFVIDKRHFSAFVGTDLDLQLRRRGIDTI
USA300_FPR3757 DVLQPNAMISLPPKEGDDYSRFHHLLDKRDDDFVIDKRHFSAFVGTDLDLQLRRRGIDTI
******.*****************************************************
COL VLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLHQFPIDNVFPLMGQTITTNDF
N315 VLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLHQFPIDNVFPLMGQTITTNDF
NCTC8325 VLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLHQFPIDNVFPLMGQTITTNDF
Newman VLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLHQFPIDNVFPLMGQTITTNDF
USA300_FPR3757 VLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLHQFPIDNVFPLMGQTITTNDF
************************************************************
COL LNILN
N315 LNILN
NCTC8325 LNILN
Newman LNILN
USA300_FPR3757 LNILN
*****