⊟Summary[edit | edit source]
- pan ID?: SAUPAN000384000
- symbol?: —
- synonym:
- description?: transcriptional regulator
- transcriptional regulator
- TfoX/Sxy family protein
- TfoX N-terminal domain family protein
- TfoX domain-containing protein
- TfoX N-domain family protein
- TfoX N-terminal domain-containing protein
- tfoX N-terminal domain protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 393426..393632
- synteny block?: BlockID0001750
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0091
08BA02176:
C248_0080
11819-97:
MS7_0084
6850:
RSAU_000037
71193:
ST398NM01_0104
ECT-R 2:
ECTR2_48
ED133:
—
ED98:
SAAV_0039
HO 5096 0412:
SAEMRSA15_00550
JH1:
SaurJH1_0081
JH9:
SaurJH9_0078
JKD6008:
SAA6008_00076 (tFox)
JKD6159:
SAA6159_00070 (tFox)
LGA251:
SARLGA251_00700
M013:
M013TW_0077
MRSA252:
SAR0101
MSHR1132:
SAMSHR1132_00660
MSSA476:
SAS0061
Mu3:
SAHV_0090
Mu50:
SAV0091
MW2:
MW0061
RF122:
SAB0035
ST398:
SAPIG0104
T0131:
SAT0131_00076 (xerD)
TCH60:
HMPREF0772_10400
TW20:
SATW20_01100
USA300_TCH1516:
USA300HOU_0098
VC40:
SAVC_00180
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MATKKDVHDLFLNHVNSNAVKTRKMMGEYIIYYDGVVIGGLYDNRLLVKATKSAQQKLQD
N315 MATKKDVHDLFLNHVNSNAVKTRKMMGEYIIYYDSVVIGGLYDNRLLVKATKSVRHQLQD
NCTC8325 MATKKDVHDLFLNHVNSNAVKTRKMMGEYIIYYDGVVIGGLYDNRLLVKATKSAQQKLQD
Newman MATKKDVHDLFLNHVNSNAVKTRKMMGEYIIYYDGVVIGGLYDNRLLVKATKSAQQKLQD
USA300_FPR3757 MATKKDVHDLFLNHVNSNAVKRRKMMGEYIIYYDGVVIGGLYDNRLLVKATKSAQQKLQD
********************* ************.******************.:::***
COL NTLVSPYPGSKEMILILDFTEATNLTDLFKTIKNDLKK
N315 NTLVSPYPGAKEMILIPDITEAINLTNLFELIKNDLKN
NCTC8325 NTLVSPYPGSKEMILILDFTEATNLTDLFKTIKNDLKK
Newman NTLVSPYPGSKEMILILDFTEATNLTDLFKTIKNDLKK
USA300_FPR3757 NTLVSPYPGSKEMILILDFTEATNLTDLFKTIKNDLKK
*********:****** *:*** ***:**: ******: