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__TOC__ | |||
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<aureodatabase>annotation</aureodatabase> | <aureodatabase>annotation</aureodatabase> | ||
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*<aureodatabase>gene length</aureodatabase> | *<aureodatabase>gene length</aureodatabase> | ||
*<aureodatabase>essential</aureodatabase> | *<aureodatabase>essential</aureodatabase> | ||
*<aureodatabase>gene | *<aureodatabase>gene comment</aureodatabase> | ||
</protect> | </protect> | ||
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*<aureodatabase>gene GI</aureodatabase> | *<aureodatabase>gene GI</aureodatabase> | ||
*<aureodatabase>gene RefSeq</aureodatabase> | *<aureodatabase>gene RefSeq</aureodatabase> | ||
*<aureodatabase>gene BioCyc</aureodatabase> | |||
*<aureodatabase>gene MicrobesOnline</aureodatabase> | *<aureodatabase>gene MicrobesOnline</aureodatabase> | ||
</protect> | </protect> | ||
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==Phenotype== | ==Phenotype== | ||
</protect> | </protect> | ||
Share your knowledge and add information here. [<span class="plainlinks">[//aureowiki.med.uni-greifswald.de/index.php?title={{PAGENAMEE}}&veaction=edit§ion=6 edit]</span>] | |||
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<aureodatabase>RNA regulated operons</aureodatabase> | |||
</protect> | |||
<protect> | |||
=Protein= | =Protein= | ||
<aureodatabase>protein 3D view</aureodatabase> | <aureodatabase>protein 3D view</aureodatabase> | ||
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==Structure, modifications & | ==Structure, modifications & cofactors== | ||
*<aureodatabase>protein domains</aureodatabase> | *<aureodatabase>protein domains</aureodatabase> | ||
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*<aureodatabase>protein cofactors</aureodatabase> | *<aureodatabase>protein cofactors</aureodatabase> | ||
*<aureodatabase>protein effectors</aureodatabase> | *<aureodatabase>protein effectors</aureodatabase> | ||
*<aureodatabase>protein | *<aureodatabase>protein regulated operons</aureodatabase> | ||
</protect> | </protect> | ||
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*<aureodatabase>protein RefSeq</aureodatabase> | *<aureodatabase>protein RefSeq</aureodatabase> | ||
*<aureodatabase>protein UniProt</aureodatabase> | *<aureodatabase>protein UniProt</aureodatabase> | ||
*<aureodatabase>protein STRING</aureodatabase> | |||
</protect> | </protect> | ||
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== | ==Experimental data== | ||
*<aureodatabase>protein validated peptides</aureodatabase> | *<aureodatabase>protein validated peptides</aureodatabase> | ||
*<aureodatabase>protein validated localization</aureodatabase> | |||
*<aureodatabase>protein validated quantitative data</aureodatabase> | |||
*<aureodatabase>protein partners</aureodatabase> | |||
</protect> | </protect> | ||
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==Regulation== | ==Regulation== | ||
*<aureodatabase>regulators</aureodatabase> | *<aureodatabase>regulators</aureodatabase> | ||
</protect> | </protect> | ||
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<protect> | <protect> | ||
== | ==Protein stability== | ||
*<aureodatabase>protein half-life</aureodatabase> | *<aureodatabase>protein half-life</aureodatabase> |
Latest revision as of 14:59, 10 July 2017
UniProt: 10-MAY-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus NCTC8325
- locus tag: SAOUHSC_01139/SAOUHSC_01141
- pan locus tag?: SAUPAN003446000
- symbol: bshC
- pan gene symbol?: bshC
- synonym:
- product: Putative cysteine ligase BshC
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
⊟Accession numbers[edit | edit source]
- Gene ID:
- RefSeq:
- BioCyc: G1I0R-1070 BioCyc
- MicrobesOnline: 1289595 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
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1021
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1561
1621ATGGACTGTAAAGTAGTTAGTTTAAATGAAAAAGATCAGTTTATACCAAAAATAAAGAGC
AGTGACCCTGTAATAACAGGATTATTTCAATATGATGCAGCTCAACAAACTAGTTTTGAA
AAAAGGATGTCTAAAGAAAATAATGGAAGAGAAGCGGCATTAGCGAATGTTATTCGTGAA
TATATGAGTGATTTAAAGCTTTCAAGCTTTCAAGTGAACAAGAATTAAACATACAACATT
TAGCTAATGGTTCAAAAGTTGTGATTGGTGGACAACAAGCAGGGCTTTTCGGGGGACCAT
TGTATACATTCCATAAAATATTTTCAATCATTACTTTATCTAAGGAATTAACGGATACAC
ATAAGCAACAAGTAGTACCAGTTTTTTGGATTGCAGGAGAAGATCATGATTTCGATGAAG
TGAATCATACATTTGTTTATAACGAAAATCATGGGTCGCTGCATAAGGTTAAATATCATA
CAATGGAGATGCCAGAGACGACTGTCTCTAGATATTATCCTGATAAGGCTGAGTTGAAAC
AAACTTTAAAAACGATGTTCATTCATATGAAAGAAACTGTTCATACACAAGGTCTACTGG
AGATTTGTGACAGAATTATTGACCAATATGACTCGTGGACTGATATGTTTAAAGCACTAC
TGCATGAAACATTTAAAGCATATGGCGTTCTATTTATAGATGCGCAGTTTGAGCCGTTAA
GAAAAATGGAAGCGCCTATGTTTAAAAAGATTTTGAAAAAACATCAGTTGCTTGATGATG
CTTTTAGAGCAACACAACAACGTACTCAAAATCAAGGCTTGAATGCGATGATACAAACAG
ATACAAATGTTCATTTATTCTTACATGATGAAAATATGCGTCAATTAGTTTCGTATGATG
GTAAGCATTTTAAATTAAATAAAACAGATAAGACATATATAAAGGAAGAAATTATAAATA
TTGCGGAAAATCAACCTGAATTATTTTCTAATAATGTAGTGACAAGACCATTAATGGAAG
AATGGTTATTTAACACGGTGGCATTTGTTGGAGGACCGAGTGAAATTAAGTACTGGGCTG
AACTAAAAGATGTATTTGAACTATTTGATGTTGAAATGCCTATCGTGATGCCAAGGCTTA
GAATTACTTATTTAAATGACCGTATAGAAAAATTACTTTCGAAATACAATATTCCATTAG
AAAAAGTGTTAGTCGATGGTGTTGAAGGAGAAAGAAGTAAGTTTATTAGAGAACAAGCAT
CACATCAATTTATTGAAAAGGTAGAAGGTATGATTGAACAACAGCGTCGTCTAAACAAAG
ACTTATTAGATGAAGTGGCGGGGAATCAAAATAATATTAACCTTGTGAATAAAAATAATG
AAATTCATATACAACAGTATGATTATTTGTTAAAACGTTATCTTTTAAACATTGAAAGAG
AAAACGACATCAGTATGAAGCAATTTAGAGAAATTCAAGAAACACTCCATCCAATGGGAG
GATTACAAGAAAGAATATGGAATCCACTTCAAATTTTGAATGATTTTGGGACAGATGTGT
TCAAGCCCTCCACCTATCCACCACTTTCTTACACTTTTGATCATATTATTATAAAACCTT
AA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAOUHSC_01139/SAOUHSC_01141
- symbol: BshC
- description: Putative cysteine ligase BshC
- length:
- theoretical pI:
- theoretical MW:
- GRAVY:
⊟Function[edit | edit source]
- reaction: EC 6.-.-.-? ExPASy
- TIGRFAM:
- TheSEED: data available for COL, N315, USA300_FPR3757
- PFAM:
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb:
- LocateP:
- SignalP:
- predicted transmembrane helices (TMHMM):
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- predicted SigA promoter [2] : S470 > SAOUHSC_01135 > SAOUHSC_01136 > SAOUHSC_01137 > bshC
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: [2] Multi-gene expression profiles
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.
⊟Literature[edit | edit source]
⊟References[edit | edit source]
- ↑ Dierk-Christoph Pöther, Philipp Gierok, Manuela Harms, Jörg Mostertz, Falko Hochgräfe, Haike Antelmann, Chris J Hamilton, Ilya Borovok, Michael Lalk, Yair Aharonowitz, Michael Hecker
Distribution and infection-related functions of bacillithiol in Staphylococcus aureus.
Int J Med Microbiol: 2013, 303(3);114-23
[PubMed:23517692] [WorldCat.org] [DOI] (I p) - ↑ 2.0 2.1 2.2 Ulrike Mäder, Pierre Nicolas, Maren Depke, Jan Pané-Farré, Michel Debarbouille, Magdalena M van der Kooi-Pol, Cyprien Guérin, Sandra Dérozier, Aurelia Hiron, Hanne Jarmer, Aurélie Leduc, Stephan Michalik, Ewoud Reilman, Marc Schaffer, Frank Schmidt, Philippe Bessières, Philippe Noirot, Michael Hecker, Tarek Msadek, Uwe Völker, Jan Maarten van Dijl
Staphylococcus aureus Transcriptome Architecture: From Laboratory to Infection-Mimicking Conditions.
PLoS Genet: 2016, 12(4);e1005962
[PubMed:27035918] [WorldCat.org] [DOI] (I e)
⊟Relevant publications[edit | edit source]
Dierk-Christoph Pöther, Philipp Gierok, Manuela Harms, Jörg Mostertz, Falko Hochgräfe, Haike Antelmann, Chris J Hamilton, Ilya Borovok, Michael Lalk, Yair Aharonowitz, Michael Hecker
Distribution and infection-related functions of bacillithiol in Staphylococcus aureus.
Int J Med Microbiol: 2013, 303(3);114-23
[PubMed:23517692] [WorldCat.org] [DOI] (I p)