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NCBI: 02-MAR-2017

Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS11965 [old locus tag: SACOL2276 ]
  • pan locus tag?: SAUPAN005745000
  • symbol: SACOL_RS11965
  • pan gene symbol?:
  • synonym:
  • product: purine nucleosidase

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SACOL_RS11965 [old locus tag: SACOL2276 ]
  • symbol: SACOL_RS11965
  • product: purine nucleosidase
  • replicon: chromosome
  • strand: -
  • coordinates: 2336598..2337539
  • length: 942
  • essential: unknown other strains

Accession numbers[edit | edit source]

  • Location: NC_002951 (2336598..2337539) NCBI
  • BioCyc: G1G4B-2505 BioCyc
  • MicrobesOnline: see SACOL2276

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    GTGACTAAGAAAGTTTATTTTAACCACGATGGTGGTGTAGATGATTTAGTATCTCTATTT
    TTATTATTACAAATGGAAAACGTTCAATTGATAGGGGTCAGTACAATTGGTGCTGATTGT
    TATTTAGAGCCATCTTTGAGCGCATCAGTAAAAATTATTAATCGTTTTTCAAATGAAGAT
    ATTCAAGTTGCGCCATCATATGAACGAGGAAAAAATCCATTTCCTAAAGAATGGCGTATG
    CATGCCTTTTTTATGGACGCATTGCCAATTTTAAATGAGCCAGTCAAACATGTTGCTTCA
    AATGTGAGCGACAAAGAAGCCTTTGAAGACATTATTCAAACTTTAAAGAGACAATCAGAA
    AAAGTAACATTATTATTTACAGGCCCGCTTACAGATTTAGCAAAAGCACTACAAAAAGAT
    TCATCTATCGTTCAGTATATAGAAAAATTAGTTTGGATGGGTGGCACCTTTTTACCAAAA
    GGAAATGTTGAAGAACCTGAGCATGATGGTTCTGCAGAATGGAATGCATATTGGGATCCA
    GAAGCGGTTAAAATTGTTTTTGATAGCGATATAGAGATTGATATGGTTGCTTTAGAAAGT
    ACGAATCAAGTACCGCTAACGTTAGATGTTAGACAAAGATGGGCGAATGAACGCCAATAT
    ACGGGCATTGATTTTTTAGGAGTAAGTTATGCAGCGGTACCACCATTAACACACTTTATA
    ACAAATTCTACTTACTTTTTATGGGATGTTTTAACGACTGCTTATATTGGTAACAAGGAC
    TTGGTTCATTCAATTGAGAAAAAAGTCGATGTAATAAGTTATGGACCAAGTCAAGGTAAG
    ACATTTGAGTGTAAAGATGGGCGCAAAATTAATGTCATAAATCATGTAGATAACAACGCA
    TTTTTTGATTATATAACTGCACTTGCTAAAAAAGTAAATTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    942

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SACOL_RS11965 [old locus tag: SACOL2276 ]
  • symbol: SACOL_RS11965
  • description: purine nucleosidase
  • length: 313
  • theoretical pI: 4.78529
  • theoretical MW: 35361.9
  • GRAVY: -0.19393

Function[edit | edit source]

  • TIGRFAM:
    Metabolism Biosynthesis of cofactors, prosthetic groups, and carriers Menaquinone and ubiquinone O-succinylbenzoate-CoA ligase (TIGR01923; EC 6.2.1.26; HMM-score: 13.8)
  • TheSEED: see SACOL2276
  • PFAM:
    no clan defined IU_nuc_hydro; Inosine-uridine preferring nucleoside hydrolase (PF01156; HMM-score: 172.6)

Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.066744
    • TAT(Tat/SPI): 0.002157
    • LIPO(Sec/SPII): 0.005834
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit | edit source]

Protein sequence[edit | edit source]

  • MTKKVYFNHDGGVDDLVSLFLLLQMENVQLIGVSTIGADCYLEPSLSASVKIINRFSNEDIQVAPSYERGKNPFPKEWRMHAFFMDALPILNEPVKHVASNVSDKEAFEDIIQTLKRQSEKVTLLFTGPLTDLAKALQKDSSIVQYIEKLVWMGGTFLPKGNVEEPEHDGSAEWNAYWDPEAVKIVFDSDIEIDMVALESTNQVPLTLDVRQRWANERQYTGIDFLGVSYAAVPPLTHFITNSTYFLWDVLTTAYIGNKDLVHSIEKKVDVISYGPSQGKTFECKDGRKINVINHVDNNAFFDYITALAKKVN

Experimental data[edit | edit source]

  • experimentally validated: see SACOL2276
  • protein localization: see SACOL2276
  • quantitative data / protein copy number per cell:
  • interaction partners:

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]