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PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

NCBI: 02-MAR-2017

Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS09535 [old locus tag: SACOL1859 ]
  • pan locus tag?: SAUPAN004553000
  • symbol: SACOL_RS09535
  • pan gene symbol?:
  • synonym:
  • product: NTPase

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS, pseudogene
  • locus tag: SACOL_RS09535 [old locus tag: SACOL1859 ]
  • symbol: SACOL_RS09535
  • product: NTPase
  • replicon: chromosome
  • strand: -
  • coordinates: 1908504..1912319
  • length: 3816
  • essential: unknown other strains

Accession numbers[edit | edit source]

  • Location: NC_002951 (1908504..1912319) NCBI
  • BioCyc: SACOL_RS09535 BioCyc
  • MicrobesOnline: see SACOL1859

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
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    1021
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    1141
    1201
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    1321
    1381
    1441
    1501
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    1621
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    ATGGAAGAAGGTTATCGATTAAAGTTTATATTTATTGGAAATCAAAATAATAATATTAAA
    AATAAGAATTTTTCAAATCCACATAATATATTATTCGATAGTAAAAAAGATATTATTTTA
    ACTCAAGACTTATGCGAAGAGTTTTTGAATTTAAACATAAATAAGCAAGATCACGCTATT
    GAATTATTAAAAAAAGAATTATCTCCGCTTTTATTTGAAGATTCTTTGTCATATTTAAAA
    GAAGAATTTATTAATGAAAAATTAGAATTTAATATATCGAATTTAGCTTCACGATATACT
    GCGAATAATGATGTCGATACTATTAATAATAAAATTATAGAAGGTATTTCTATTACCAAT
    AATTTTAAATATACTAATATTTCATATCTAAAAGAATTAAAAGGTTATATCGAAAATGAT
    ATTTTAGATAAGATGAAATCAAAATACGCAAAGAATATTTATTTGAATTTCAAAAAAATA
    TTCTCTAATTTAGAACAATCAGTCAATAATTATTTGGAACTGGAAGAAGAGTTTGAAGAA
    AAGAAAAAATACTTAAGTGAAATTTATGAATTGATAGACGAAATTAATATTGACCCTTAT
    ATTTTTCTGACAGAACATAATGAATGTAATATATACAAAATAAGTGAGAATGAAAAATTA
    GAACTTCAAACTTATATGAGTAAAATCGAAAAAGTATTATTAAAATATCAAACGTATTTA
    AAAGAAACATGTAAAGAATGCTTGTTTTATCCTTATTTGCTAGTTCAAGGTGAAGCTGGC
    ATAGGAAAATCACACCTTTTAGCGCATCTATCTAAAAAACTTAGAGATGAAAATCATATT
    ATTTATCTGTTTTTGGGACAATTTTTTACTAAAAATGAAGATCCATGGCATCAAATACTT
    AATGATTTAGAAGTTACAAATTCTGTTGATAATTTTTTAAGGTCAATAAGTAATAAGGCC
    AAAGAAACAAAAAAAAGAGCTTTTATTATTATTGATGCGCTTAATGAAGGTGAAGGTAAA
    AGGTTATGGGGAAATTATTTTCAAAGCTTTATCAACCATATAAAGAAGTATTCTAATATA
    GCTTTAATATTTTCTATTAGAACCCCTTTTGAAGATGTTATATTACCCAAAAACGCAATA
    CAAGATAACAATATTGTAGTATTTCAGCATGAAGGTTTTAGTAAGGAAGAAAACTATAAT
    CCAATTGTATCTTTTTGTGATTTTTATGGATTAGAGCTACCTAAGTTACCTATATTAAAT
    CCAGAATTCAACAATCCATTATTTTTAAAACTAATGTGTGAGTACTGTGTAAATAAATTT
    AAGGAATTTGACCAAACTATAAGTGTTGCAGAGCTATTTACAAATGTTCTTAAGACAGTA
    AATATTAATTTATCTAAGGAAGATAAATTTGATTTTGATAAAAATATTAATGTTGTACAA
    AAAGTAATAAAAGGATTAGTTGAATTAATGAACGACTCAGAATTTAATCAACTAAATTAT
    GAGGAATCCTATACTGTTGTTAATAATATAGCTAAAGAGTATGTTCAAAAGTCAAATAGA
    TTTTTAGAAGCGCTAATAGATGAAAATATATTAATTAAAAATACTGGCTATAAAGGTGAA
    ATGATTATTTATTTTTCGTATGAGCGTATGGGAGATTACTTTTTATCAGAATACCTTTTA
    GAGAAATATAGAAATGTTGATAAAAGAGATTTAGTAACTAAATTACAGTCAGATGAAAAA
    GTGACAAGGTATTTTCAAAAGGAAGACGATTTATCTTATAATAGAGGTCTTATTAATGAA
    CTTTTTATTAAATTAGCAAATGAATTTAATATAGAGCTATTTGAAGTATTTCCACAGTTT
    AAAAACAATTATAACATGATATATTCTTTTATAAATAGTTTAGTATGGAGAAAAGATGGT
    AGCATAAGTAAACATACTAAATGCTATATATCCGATAATGTTATTCCTTATGATGCATTT
    AGAAATAATTTTTTAGATGTCTTATTAATAAAAATGCCTCAAAAAAACCATCCGTTAAAT
    ATTTGGGCTTTACATAAATTATTGAAACAATGCAATTTAGGAAAAAGAGATTTTTTATGG
    ACTCAATATATATCTATAAATAATGAAAAGGTTTTTGAAATTATTAATTGGCTATTTAGT
    AACTATAAGAAATTAGATGAAGAAACTGCGGAAAAATATATGATTTTTTTAACGTGGATA
    TTTTCTGCAACTAATAATAAATTAAGAGATCTCGGTACTAAATCTTTAGTAAAATTATTC
    AAAACATTTCCAACTAAAATTATTGGTTTATTAAAATTATTTGAAAATAACAATGATCCA
    TATATAGTCGAAAGATTATATGCTTCTGTTTTAGGGGCGACACTTCGAATCGACATTTGT
    GAAATACATATAGAGATTGCTAATTATATTTATGAAGAAATATTTGATAAAGAAATGGTA
    TATCCTCATATTTTAATGAGAGATTATGCTAGGCAAACAATTGAATATATTAGTTTATCA
    AAAGATATATCTAATATAAATTTAGAAAAAATTAGGCCACCTTATAAAAGTAATTGGTAT
    AAAAAAGAATATTCGAATTTAAATATAGACGATTACATAAAATCTTTAAAAAACAAATTA
    GATAGCCATTTACATTTTTCTATCGATAAAATTAAAAACTCAATGACAACGGAATATGGA
    AGAGGAACTGGGGCATATGGCGATTTTGGCAGATATGTATTTGGTTATGCTGTACGAAAC
    TGGGTAAAGGGTTTTAAAAGTGATCAAGACTTAAGTAATATAGCATTAATGAGGATTTTT
    GAAATGGGTTATGATGCAAAATTACATGGTGAATTTGATATGTGGGTTAATCGTTATGAT
    AACTTTAATAATTCAATTGAAAGAATTAGCAAAAAATATCAATGGATTGCTTACTATGAA
    ATTTTAGCTAAACTTGTAGATAAATTTCCTGATGTTCAATATTCTGGACTATGGGATGAT
    TATATTAGAGATATTGATCCTACTTTACTATTACTTGAAATTGATAAATAATCAAAAATA
    CTAGTACCCTCACCACTTCCTTCGCATCAATCGAATGAATGGGTAAAAAATACCAAAGTT
    TTTGATGAAACAAAATTATTTTTAGAAATAGATATAGACAATCATAGATATATATGTTTA
    AGCTCAAAGTTTAATTTTGAAAAGAGAGAGAAAGAAATACCATTTGAAGATAGAGACTCA
    TGTTATTTCTTAGCGATGGGATATTTTTATAATAAAGAAGATAGTAATGAAATTATCAAA
    GGTTATGAAAATAATTATGATAGAGGTATTAATATTCCTCGAGCACATAGTATATATTTA
    TATGAATATTATTGGAGCGAAGCTTATAAAAATTATAAAGAGGGATATTTAACTGAATCA
    GATGGTAAATTATGTCCAGCTATTTATGAATATTTTTGGGAGTTAGATTATTCTGTTAAG
    GACAAATCAATAAGTTTTTATATTCCGTGTAAAGAAATAGTAGATTATTTTTCATTAATA
    CAAACGGAAGAAGGAGTATGGAAAACTAAATTTGGTGAAACAATATGTATTAATTCTAAA
    TTACTCGAATTTGATAATGAATGTTTACTTATTAAAAAAGAAAGTTTATTAAACTTTCTT
    AATACTAAAAAATTGTCTATTGGATGGAAAATATATCTAGAAAAAATTTCTCTTCGAGAT
    AGACAAGAATGGTGGTACAATGTTTTTTATGACGATGGCAAATATAATAAGAAAATAATT
    AAGAATGACATGTCAAAAATTAGGCGTAATTTTTAG
    60
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    3816

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SACOL_RS09535 [old locus tag: SACOL1859 ]
  • symbol: SACOL_RS09535
  • description: NTPase
  • length:
  • theoretical pI:
  • theoretical MW:
  • GRAVY:

Function[edit | edit source]

Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Localization[edit | edit source]

  • PSORTb:
  • LocateP:
  • SignalP:
  • predicted transmembrane helices (TMHMM):

Accession numbers[edit | edit source]

Protein sequence[edit | edit source]

Experimental data[edit | edit source]

  • experimentally validated: data available for NCTC8325
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]