From AureoWiki
Jump to navigation Jump to search

NCBI: 02-MAR-2017

Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS04245 [old locus tag: SACOL0826 ]
  • pan locus tag?: SAUPAN002680000
  • symbol: SACOL_RS04245
  • pan gene symbol?: lgt
  • synonym:
  • product: prolipoprotein diacylglyceryl transferase

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SACOL_RS04245 [old locus tag: SACOL0826 ]
  • symbol: SACOL_RS04245
  • product: prolipoprotein diacylglyceryl transferase
  • replicon: chromosome
  • strand: +
  • coordinates: 851930..852769
  • length: 840
  • essential: unknown other strains

Accession numbers[edit | edit source]

  • Location: NC_002951 (851930..852769) NCBI
  • BioCyc: SACOL_RS04245 BioCyc
  • MicrobesOnline: see SACOL0826

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGGGTATTGTATTTAACTATATAGATCCTGTGGCATTTAACTTAGGACCACTGAGTGTA
    CGATGGTATGGAATTATCATTGCTGTCGGAATATTACTTGGTTACTTTGTTGCACAACGT
    GCACTAGTTAAAGCAGGATTACATAAAGATACTTTAGTAGATATTATTTTTTATAGTGCA
    CTATTTGGATTTATCGCGGCACGAATCTATTTTGTGATTTTCCAATGGCCATATTACGCG
    GAAAATCCAAGTGAAATTATTAAAATATGGCATGGTGGAATAGCAATACATGGTGGTTTA
    ATAGGTGGCTTTATTGCTGGTGTTATTGTATGTAAAGTGAAAAATTTAAACCCATTTCAA
    ATTGGTGATATCGTTGCGCCAAGTATAATTTTAGCGCAAGGAATTGGACGCTGGGGTAAC
    TTTATGAATCACGAGGCACATGGTGGATCGGTGTCACGCGCTTTTTTAGAACAATTACAT
    TTGCCTAATTTTATAATAGAAAATATGTATATTAACGGCCAATATTATCATCCAACATTC
    TTATATGAATCCATTTGGGATGTCGCTGGATTTATTATCTTAGTTAATATTCGTAAACAT
    TTAAAATTAGGAGAAACATTCTTTTTATATTTAACTTGGTATTCAATTGGTCGATTCTTT
    ATAGAAGGATTACGTACAGATAGCTTAATGCTCACAAGTAATATTAGAGTTGCACAATTA
    GTATCAATTCTTTTAATTTTAATAAGTATAAGTTTAATTGTATATAGAAGGATTAAGTAT
    AATCCACCGTTGTATAGCAAAGTTGGGGCGCTTCCATGGCCAACAAAAAAAGTGAAGTAG
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SACOL_RS04245 [old locus tag: SACOL0826 ]
  • symbol: SACOL_RS04245
  • description: prolipoprotein diacylglyceryl transferase
  • length: 279
  • theoretical pI: 9.85929
  • theoretical MW: 31572.1
  • GRAVY: 0.573477

Function[edit | edit source]

  • reaction:
    EC 2.4.99.-?  ExPASy
  • TIGRFAM:
    Genetic information processing Protein fate Protein modification and repair prolipoprotein diacylglyceryl transferase (TIGR00544; EC 2.4.99.-; HMM-score: 245.6)
  • TheSEED: see SACOL0826
  • PFAM:
    no clan defined LGT; Prolipoprotein diacylglyceryl transferase (PF01790; HMM-score: 257.7)

Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 4
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.003509
    • TAT(Tat/SPI): 0.000162
    • LIPO(Sec/SPII): 0.002101
  • predicted transmembrane helices (TMHMM): 5

Accession numbers[edit | edit source]

Protein sequence[edit | edit source]

  • MGIVFNYIDPVAFNLGPLSVRWYGIIIAVGILLGYFVAQRALVKAGLHKDTLVDIIFYSALFGFIAARIYFVIFQWPYYAENPSEIIKIWHGGIAIHGGLIGGFIAGVIVCKVKNLNPFQIGDIVAPSIILAQGIGRWGNFMNHEAHGGSVSRAFLEQLHLPNFIIENMYINGQYYHPTFLYESIWDVAGFIILVNIRKHLKLGETFFLYLTWYSIGRFFIEGLRTDSLMLTSNIRVAQLVSILLILISISLIVYRRIKYNPPLYSKVGALPWPTKKVK

Experimental data[edit | edit source]

  • experimentally validated: data available for NCTC8325
  • protein localization: see SACOL0826
  • quantitative data / protein copy number per cell:
  • interaction partners:

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]