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NCBI: 02-MAR-2017

Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS03265 [old locus tag: SACOL0632 ]
  • pan locus tag?: SAUPAN002364000
  • symbol: SACOL_RS03265
  • pan gene symbol?:
  • synonym:
  • product: hypothetical protein

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SACOL_RS03265 [old locus tag: SACOL0632 ]
  • symbol: SACOL_RS03265
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 663514..664278
  • length: 765
  • essential: unknown other strains

Accession numbers[edit | edit source]

  • Location: NC_002951 (663514..664278) NCBI
  • BioCyc: G1G4B-677 BioCyc
  • MicrobesOnline: see SACOL0632

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGGACATAAATTCAGAAGAATACAAACAAGAGGTACTTATCAAAGACGTTGTCATGCTT
    GCTGCTCGCATACTATTAGAATCTGGTGCAGAAGGTACGCGTGTAGAAGATACCATGACA
    CGTATTGCAAAAAAACTTGGTTACAGTGAAAGTAACAGCTTTGTTACAAACACTGTCATC
    CAGTTTACGTTACATTCGGAATCGTTTCCTAGAATATTTAGAATTACCTCTCGAGATACA
    AACTTAATAAAAATTTCTCAAGCTAATAAAATTTCGCGTCAAATTACAAACAATGAAATT
    TCTTTAGCCGAAGCAAAAACGCAACTTGAAAAAATATATGTTGCTAAGCGTGACAGCAGT
    CTTCCCTTTAAAGGTTTTGCTGCAGCAATGATTGCAATGAGTTTCTTATATTTACAAGGT
    GGTAGATTGATTGATGTTTTAACTGCGATATTAGCAGGTAGTCTAGGATACCTAGTCACT
    GAGATTTTAGATCGTAAGTTACACGCACAGTTTATCCCAGAATTCATTGGTTCATTAGTT
    ATTGGGATTATCGCCGTTATTGGACATACACTTATTCCAACAGGTGACTTGGCAACTATT
    ATCATTGCGGCAGTCATGCCTATTGTTCCTGGTGTATTAATAACAAACGCAATACAAGAT
    TTATTTGGTGGACACATGTTGATGTTCACAACGAAATCATTAGAAGCATTGGTTACTGCG
    TTTGGCATCGGTGCTGGCGTTGGTAGCGTATTAATTTTAGTATAG
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    765

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SACOL_RS03265 [old locus tag: SACOL0632 ]
  • symbol: SACOL_RS03265
  • description: hypothetical protein
  • length: 254
  • theoretical pI: 6.97582
  • theoretical MW: 27556.2
  • GRAVY: 0.501969

Function[edit | edit source]

  • TIGRFAM:
  • TheSEED: see SACOL0632
  • PFAM:
    UMP_1 (CL0470) ThrE; Putative threonine/serine exporter (PF06738; HMM-score: 206.2)
    and 3 more
    ThrE_2; Threonine/Serine exporter, ThrE (PF12821; HMM-score: 42.1)
    Ferritin (CL0044) Ribonuc_red_sm; Ribonucleotide reductase, small chain (PF00268; HMM-score: 13.5)
    no clan defined RseC_MucC; Positive regulator of sigma(E), RseC/MucC (PF04246; HMM-score: 8.8)

Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.01
    • Cytoplasmic Membrane Score: 9.35
    • Cellwall Score: 0.32
    • Extracellular Score: 0.32
    • Internal Helices: 5
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.008942
    • TAT(Tat/SPI): 0.001427
    • LIPO(Sec/SPII): 0.001429
  • predicted transmembrane helices (TMHMM): 4

Accession numbers[edit | edit source]

Protein sequence[edit | edit source]

  • MDINSEEYKQEVLIKDVVMLAARILLESGAEGTRVEDTMTRIAKKLGYSESNSFVTNTVIQFTLHSESFPRIFRITSRDTNLIKISQANKISRQITNNEISLAEAKTQLEKIYVAKRDSSLPFKGFAAAMIAMSFLYLQGGRLIDVLTAILAGSLGYLVTEILDRKLHAQFIPEFIGSLVIGIIAVIGHTLIPTGDLATIIIAAVMPIVPGVLITNAIQDLFGGHMLMFTTKSLEALVTAFGIGAGVGSVLILV

Experimental data[edit | edit source]

  • experimentally validated: see SACOL0632
  • protein localization: see SACOL0632
  • quantitative data / protein copy number per cell:
  • interaction partners:

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]